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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926256.1_cds_XP_016474326.1_66371
CDS Infomation

[gene=LOC107796112] [db_xref=GeneID:107796112] [protein=rust resistance kinase Lr10-like] [protein_id=XP_016474326.1] [location=join(29610..30333,31049..31123,32048..33153)] [gbkey=CDS]
Sequence

ATGGATATCACTTCATTTGTAAGCTTCCTTCTATCTCTTCTTCTGATCTTAGTTCAGGCA
AATGGCAGAAACGATTCTAGTTGTCCAAAGTCCTTTTCTTGTGGGAATCTTACTGACCTG
AGCTTTCCTTTCTCTCTTTCCACACAACCTGATTGTGGAATAATCCCTATATCTGGTTGT
GATGCTAAACCTTATCCCAGAATCCGTCTGCTTCCCGGAGGTGATTGGTACTATGCTTTA
GAGAAGCAATATTCATCAATTTGGCTTGGGGACGCGGAGTTTCAAACGACATTGAATCAA
CACAAGTGCCAGGCTTTTAACAAAGATTTCTTCCTTCCAATCTCTCCTTCTGTTTCTTTC
CCAATACTTAATACTTACAACTTCTTCAAATGCAACAGCACCAATAATAATACCCCGAAC
ATTACCCAGAAGAAGAACAATCATTTTGCTGGTTATAAAATGTACAATGGCTGTAAAGGC
TTCAGCATATACTACAAGCTTCCCGGAGATGATAATGTTAAAGACATTCCAGCAGACAAT
CTTCCTACCAACTGTTCACTTATCAGATTGCCATTTCACTCTGTATCGGGAGATGGTGAT
TTGTTTGACTTGTTAGGTCCCGAAATTCAAGTAGAATGGAAACTCTCTGAGGACTGTAAC
CGATGCCACTATGGTGGAGGTCAATGCCAGACTGATACAACCAACAAATTTTATTGTCAG
GATGATCTCAGCATTCTGACAACAACAGGAACATCAAAAACAGGCCACCGTCGGAGAATC
TGGCTCATACTAACCACAGGTGCAGTTTTGTTGACTGTTGCACTGTTGGTTTTACTCTTC
TGCTTCAGAGAAAAGATTGTATGGTACAAGTACATCAGGTTTTGGGAATCTAATGCTGAG
GATCACAAAAATATTGAAGCGTTTTTAAAGAACTATGGGTCATATACTCCAAAGAGATAC
AGCTATTCAGAGGTCAAAAGAATCACCAGTGGCTTCAAAAACAAACTAGGTCAAGGAGGA
TGTGGTTCTGTATACAAAGGGAGTCTGCATAATGGAAGTCACGTAGCTGTGAAGGTCCTG
AATAGGCTAAAAGACAGTGGTGAAGAATTCATTAACGAGGTGGCAATTATTAGCAGGACA
TCACATGTTAACATCGTGAACCTTGTGGGATTTTGTTTCGAGGGTCGCAAGAGAGCACTC
ATTTATGAATTCATGTCAAATGGATCTCTTGAAAAGTTTATCTATGAGGAAAGATCCGAC
GGGGTTCGCCAATTGGGCTGGCCAATATTGTATAAAATTGCACTAGGCATTGCTCGAGGA
TTGGAGTACTTGCATCGTGGTTGTAATACTCGGATTTTGCATTTTGATATAAAGCCTCAC
AACATCCTGCTTGATGACGATTTTTGTCCTAAGATTTCTGACTTTGGTCTTGCCAAACTT
TGTATGAAAAAGGAGAGCATTGTGTCAATGTTAGGTGCACGAGGGACTATGGGTTATATC
GCTCCAGAAATTGTTTGCAGAAACTTGGGAGGTGTCTCTCACAAATCTGACGTCTATAGC
TACGGAATGATGGTCCTAGAGATGGTTGGAGGAAGAAAAAATATTGATGTTGAAGTTGAC
CGTACAAGTGAAATCTACTTTCCACACTGGCTCTATGGACGAATTGAACTAGACGAAGAG
CTTCAGTTAATTGGAATAATGAATGAAGAGGAGAAAGAATGTGCAAGAAAGATGGTGATG
GTGAGTTTATGGTGCATACAAACTGATCCCTCGAATCGACCATCTATGACTAAGGCTGTA
GAAATGTTAGAAGGGAACCTAGAGCTTTTGCAGATTCCTCCCAAGCCTTACTCATATTCT
CCCTCAAGATCAGAGGTAGATTCATCAATAGTAGAATTGACCTAG

Peptide Sequence

PEP ID

XP_016474326.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like [Nicotiana tabacum]
Sequence

MDITSFVSFLLSLLLILVQANGRNDSSCPKSFSCGNLTDLSFPFSLSTQPDCGIIPISGC
DAKPYPRIRLLPGGDWYYALEKQYSSIWLGDAEFQTTLNQHKCQAFNKDFFLPISPSVSF
PILNTYNFFKCNSTNNNTPNITQKKNNHFAGYKMYNGCKGFSIYYKLPGDDNVKDIPADN
LPTNCSLIRLPFHSVSGDGDLFDLLGPEIQVEWKLSEDCNRCHYGGGQCQTDTTNKFYCQ
DDLSILTTTGTSKTGHRRRIWLILTTGAVLLTVALLVLLFCFREKIVWYKYIRFWESNAE
DHKNIEAFLKNYGSYTPKRYSYSEVKRITSGFKNKLGQGGCGSVYKGSLHNGSHVAVKVL
NRLKDSGEEFINEVAIISRTSHVNIVNLVGFCFEGRKRALIYEFMSNGSLEKFIYEERSD
GVRQLGWPILYKIALGIARGLEYLHRGCNTRILHFDIKPHNILLDDDFCPKISDFGLAKL
CMKKESIVSMLGARGTMGYIAPEIVCRNLGGVSHKSDVYSYGMMVLEMVGGRKNIDVEVD
RTSEIYFPHWLYGRIELDEELQLIGIMNEEEKECARKMVMVSLWCIQTDPSNRPSMTKAV
EMLEGNLELLQIPPKPYSYSPSRSEVDSSIVELT

Transcript Sequence

Gene sequence data has not been registered.